Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smim17A0A504 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smim17A0A504 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smim17A0A504 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smim17A0A504 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smim17A0A504 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smim17A0A504 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smim17A0A504 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smim17A0A504 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim17A0A504 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim17A0A504 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim17A0A504 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim17A0A504 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.05■□□□□ 0.8
Smim17A0A504 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim17A0A504 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smim17A0A504 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smim17A0A504 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smim17A0A504 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim17A0A504 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim17A0A504 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smim17A0A504 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smim17A0A504 Gm24804-201ENSMUST00000174982 85 ntBASIC20.03■□□□□ 0.8
Smim17A0A504 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim17A0A504 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smim17A0A504 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smim17A0A504 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim17A0A504 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim17A0A504 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim17A0A504 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim17A0A504 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smim17A0A504 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smim17A0A504 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smim17A0A504 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.02■□□□□ 0.79
Smim17A0A504 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smim17A0A504 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim17A0A504 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim17A0A504 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smim17A0A504 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim17A0A504 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smim17A0A504 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.01■□□□□ 0.79
Smim17A0A504 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smim17A0A504 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smim17A0A504 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smim17A0A504 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Smim17A0A504 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smim17A0A504 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smim17A0A504 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smim17A0A504 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Gm16148-201ENSMUST00000119653 893 ntBASIC19.99■□□□□ 0.79
Smim17A0A504 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim17A0A504 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smim17A0A504 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim17A0A504 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.97■□□□□ 0.79
Smim17A0A504 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim17A0A504 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Smim17A0A504 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim17A0A504 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
Smim17A0A504 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smim17A0A504 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.96■□□□□ 0.79
Smim17A0A504 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim17A0A504 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim17A0A504 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Smim17A0A504 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smim17A0A504 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smim17A0A504 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smim17A0A504 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim17A0A504 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim17A0A504 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Smim17A0A504 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.93■□□□□ 0.78
Smim17A0A504 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.93■□□□□ 0.78
Smim17A0A504 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smim17A0A504 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim17A0A504 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim17A0A504 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smim17A0A504 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim17A0A504 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smim17A0A504 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim17A0A504 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms