Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28729A0A1B0GSW2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.89■■□□□ 1.1
Gm28729A0A1B0GSW2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm28729A0A1B0GSW2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28729A0A1B0GSW2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28729A0A1B0GSW2 Rps24-207ENSMUST00000224568 714 ntBASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28729A0A1B0GSW2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gm28729A0A1B0GSW2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28729A0A1B0GSW2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm14117-201ENSMUST00000122417 843 ntBASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm28729A0A1B0GSW2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28729A0A1B0GSW2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Gm45102-201ENSMUST00000207427 857 ntBASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28729A0A1B0GSW2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Gm28729A0A1B0GSW2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm9959-201ENSMUST00000068277 390 ntBASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Gm28729A0A1B0GSW2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28729A0A1B0GSW2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28729A0A1B0GSW2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28729A0A1B0GSW2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Gm28729A0A1B0GSW2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Gm28729A0A1B0GSW2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Gm28729A0A1B0GSW2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.76■■□□□ 1.07
Gm28729A0A1B0GSW2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28729A0A1B0GSW2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Gm28729A0A1B0GSW2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28729A0A1B0GSW2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms