Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lnp1A0A1B0GSK3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.34■□□□□ 0.53
Lnp1A0A1B0GSK3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.33■□□□□ 0.53
Lnp1A0A1B0GSK3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lnp1A0A1B0GSK3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lnp1A0A1B0GSK3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.33■□□□□ 0.52
Lnp1A0A1B0GSK3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lnp1A0A1B0GSK3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lnp1A0A1B0GSK3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Gm11175-201ENSMUST00000116172 543 ntBASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Gm11687-201ENSMUST00000118911 886 ntBASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lnp1A0A1B0GSK3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Lnp1A0A1B0GSK3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lnp1A0A1B0GSK3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.29■□□□□ 0.52
Lnp1A0A1B0GSK3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lnp1A0A1B0GSK3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.27■□□□□ 0.52
Lnp1A0A1B0GSK3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lnp1A0A1B0GSK3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lnp1A0A1B0GSK3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Lnp1A0A1B0GSK3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lnp1A0A1B0GSK3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.27■□□□□ 0.51
Lnp1A0A1B0GSK3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lnp1A0A1B0GSK3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lnp1A0A1B0GSK3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lnp1A0A1B0GSK3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lnp1A0A1B0GSK3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lnp1A0A1B0GSK3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lnp1A0A1B0GSK3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Lnp1A0A1B0GSK3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.24■□□□□ 0.51
Lnp1A0A1B0GSK3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.24■□□□□ 0.51
Lnp1A0A1B0GSK3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lnp1A0A1B0GSK3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lnp1A0A1B0GSK3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Gm44428-201ENSMUST00000204474 874 ntBASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lnp1A0A1B0GSK3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lnp1A0A1B0GSK3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms