Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcna-ps2A0A140T8V5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcna-ps2A0A140T8V5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcna-ps2A0A140T8V5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcna-ps2A0A140T8V5 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.08■■□□□ 1.13
Pcna-ps2A0A140T8V5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcna-ps2A0A140T8V5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcna-ps2A0A140T8V5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcna-ps2A0A140T8V5 Scarna2-201ENSMUST00000157560 414 ntBASIC22.07■■□□□ 1.12
Pcna-ps2A0A140T8V5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pcna-ps2A0A140T8V5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcna-ps2A0A140T8V5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcna-ps2A0A140T8V5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Terc-201ENSMUST00000082862 423 ntBASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcna-ps2A0A140T8V5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcna-ps2A0A140T8V5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
Pcna-ps2A0A140T8V5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcna-ps2A0A140T8V5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gm16437-201ENSMUST00000025669 507 ntBASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gm9806-201ENSMUST00000051080 552 ntBASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.02■■□□□ 1.12
Pcna-ps2A0A140T8V5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcna-ps2A0A140T8V5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcna-ps2A0A140T8V5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcna-ps2A0A140T8V5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcna-ps2A0A140T8V5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcna-ps2A0A140T8V5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pcna-ps2A0A140T8V5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Pcna-ps2A0A140T8V5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Gm11687-201ENSMUST00000118911 886 ntBASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcna-ps2A0A140T8V5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcna-ps2A0A140T8V5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcna-ps2A0A140T8V5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Pcna-ps2A0A140T8V5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcna-ps2A0A140T8V5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcna-ps2A0A140T8V5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pcna-ps2A0A140T8V5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcna-ps2A0A140T8V5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Pcna-ps2A0A140T8V5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcna-ps2A0A140T8V5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcna-ps2A0A140T8V5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcna-ps2A0A140T8V5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcna-ps2A0A140T8V5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcna-ps2A0A140T8V5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcna-ps2A0A140T8V5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcna-ps2A0A140T8V5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcna-ps2A0A140T8V5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms