Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv17A0A140T8P8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv17A0A140T8P8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv17A0A140T8P8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv17A0A140T8P8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv17A0A140T8P8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv17A0A140T8P8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.77■□□□□ 0.28
Trbv17A0A140T8P8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trbv17A0A140T8P8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv17A0A140T8P8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.77■□□□□ 0.28
Trbv17A0A140T8P8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv17A0A140T8P8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv17A0A140T8P8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv17A0A140T8P8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv17A0A140T8P8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv17A0A140T8P8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv17A0A140T8P8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv17A0A140T8P8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv17A0A140T8P8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv17A0A140T8P8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv17A0A140T8P8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms