Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv26A0A0B4J1P5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Cap2-205ENSMUST00000225824 1634 ntBASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv26A0A0B4J1P5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm14523-201ENSMUST00000117260 558 ntBASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm7332-201ENSMUST00000118351 454 ntBASIC18.31■□□□□ 0.52
Trbv26A0A0B4J1P5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.31■□□□□ 0.52
Trbv26A0A0B4J1P5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv26A0A0B4J1P5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv26A0A0B4J1P5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv26A0A0B4J1P5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
Trbv26A0A0B4J1P5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trbv26A0A0B4J1P5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv26A0A0B4J1P5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv26A0A0B4J1P5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.29■□□□□ 0.52
Trbv26A0A0B4J1P5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv26A0A0B4J1P5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv26A0A0B4J1P5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv26A0A0B4J1P5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv26A0A0B4J1P5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.27■□□□□ 0.52
Trbv26A0A0B4J1P5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trbv26A0A0B4J1P5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv26A0A0B4J1P5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Trbv26A0A0B4J1P5 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv26A0A0B4J1P5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trbv26A0A0B4J1P5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv26A0A0B4J1P5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv26A0A0B4J1P5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv26A0A0B4J1P5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv26A0A0B4J1P5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv26A0A0B4J1P5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv26A0A0B4J1P5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv26A0A0B4J1P5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trbv26A0A0B4J1P5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv26A0A0B4J1P5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv26A0A0B4J1P5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv26A0A0B4J1P5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms