Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv30A0A0B4J1P1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv30A0A0B4J1P1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Trbv30A0A0B4J1P1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv30A0A0B4J1P1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv30A0A0B4J1P1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv30A0A0B4J1P1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.56■□□□□ 0.24
Trbv30A0A0B4J1P1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm27502-201ENSMUST00000183495 199 ntBASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv30A0A0B4J1P1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv30A0A0B4J1P1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv30A0A0B4J1P1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv30A0A0B4J1P1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv30A0A0B4J1P1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.53■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv30A0A0B4J1P1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv30A0A0B4J1P1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv30A0A0B4J1P1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv30A0A0B4J1P1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv30A0A0B4J1P1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv30A0A0B4J1P1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv30A0A0B4J1P1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm14523-201ENSMUST00000117260 558 ntBASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm12366-201ENSMUST00000121722 873 ntBASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm5786-201ENSMUST00000085368 882 ntBASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv30A0A0B4J1P1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbv30A0A0B4J1P1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm7332-201ENSMUST00000118351 454 ntBASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv30A0A0B4J1P1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 165.1 ms