Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gm9812-201ENSMUST00000061934 968 ntBASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-47A0A0A6YY41 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.23■□□□□ 0.51
Ighv1-47A0A0A6YY41 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-47A0A0A6YY41 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.23■□□□□ 0.51
Ighv1-47A0A0A6YY41 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-47A0A0A6YY41 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-47A0A0A6YY41 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.21■□□□□ 0.51
Ighv1-47A0A0A6YY41 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-47A0A0A6YY41 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ighv1-47A0A0A6YY41 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.21■□□□□ 0.51
Ighv1-47A0A0A6YY41 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-47A0A0A6YY41 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-47A0A0A6YY41 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ighv1-47A0A0A6YY41 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.19■□□□□ 0.5
Ighv1-47A0A0A6YY41 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 Gm45364-201ENSMUST00000210883 159 ntBASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-47A0A0A6YY41 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-47A0A0A6YY41 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-47A0A0A6YY41 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ighv1-47A0A0A6YY41 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.14■□□□□ 0.5
Ighv1-47A0A0A6YY41 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-47A0A0A6YY41 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-47A0A0A6YY41 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-47A0A0A6YY41 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-47A0A0A6YY41 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv1-47A0A0A6YY41 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-47A0A0A6YY41 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm6311-201ENSMUST00000073790 878 ntBASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-47A0A0A6YY41 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Terc-201ENSMUST00000082862 423 ntBASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv1-47A0A0A6YY41 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-47A0A0A6YY41 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.09■□□□□ 0.49
Ighv1-47A0A0A6YY41 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.09■□□□□ 0.49
Ighv1-47A0A0A6YY41 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-47A0A0A6YY41 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-47A0A0A6YY41 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-47A0A0A6YY41 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-47A0A0A6YY41 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-47A0A0A6YY41 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms