Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-4A0A075B6B4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-4A0A075B6B4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-4A0A075B6B4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-4A0A075B6B4 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.99■□□□□ 0.31
Trav6-4A0A075B6B4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-4A0A075B6B4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-4A0A075B6B4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-4A0A075B6B4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-4A0A075B6B4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-4A0A075B6B4 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.97■□□□□ 0.31
Trav6-4A0A075B6B4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-4A0A075B6B4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav6-4A0A075B6B4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-4A0A075B6B4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-4A0A075B6B4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-4A0A075B6B4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav6-4A0A075B6B4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-4A0A075B6B4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-4A0A075B6B4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-4A0A075B6B4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6-4A0A075B6B4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav6-4A0A075B6B4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-4A0A075B6B4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav6-4A0A075B6B4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Trav6-4A0A075B6B4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-4A0A075B6B4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav6-4A0A075B6B4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-4A0A075B6B4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-4A0A075B6B4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-4A0A075B6B4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav6-4A0A075B6B4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav6-4A0A075B6B4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-4A0A075B6B4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 Gm27502-201ENSMUST00000183495 199 ntBASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-4A0A075B6B4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-4A0A075B6B4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-4A0A075B6B4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Gm14523-201ENSMUST00000117260 558 ntBASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-4A0A075B6B4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-4A0A075B6B4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Gm12366-201ENSMUST00000121722 873 ntBASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Gm5786-201ENSMUST00000085368 882 ntBASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-4A0A075B6B4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms