Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm6283-201ENSMUST00000182369 1000 ntBASIC21.16■□□□□ 0.98
Kdm5cP41230 Gm21470-201ENSMUST00000187680 696 ntBASIC21.16■□□□□ 0.98
Kdm5cP41230 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Kdm5cP41230 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm5cP41230 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm5cP41230 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm5cP41230 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Kdm5cP41230 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Kdm5cP41230 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Kdm5cP41230 Gm38037-201ENSMUST00000192600 1624 ntBASIC21.16■□□□□ 0.98
Kdm5cP41230 Gm9816-201ENSMUST00000122292 1414 ntBASIC21.16■□□□□ 0.98
Kdm5cP41230 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm5cP41230 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Kdm5cP41230 Gm21009-201ENSMUST00000197169 1669 ntBASIC21.15■□□□□ 0.98
Kdm5cP41230 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC21.15■□□□□ 0.98
Kdm5cP41230 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Kdm5cP41230 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC21.15■□□□□ 0.98
Kdm5cP41230 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Kdm5cP41230 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Kdm5cP41230 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC21.15■□□□□ 0.98
Kdm5cP41230 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Kdm5cP41230 Gm7287-201ENSMUST00000205267 602 ntBASIC21.14■□□□□ 0.98
Kdm5cP41230 Gm7561-201ENSMUST00000211203 886 ntBASIC21.14■□□□□ 0.98
Kdm5cP41230 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm5cP41230 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm5cP41230 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm5cP41230 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm5cP41230 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Kdm5cP41230 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Kdm5cP41230 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC21.14■□□□□ 0.97
Kdm5cP41230 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 AC140451.2-201ENSMUST00000228030 664 ntBASIC21.14■□□□□ 0.97
Kdm5cP41230 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Kdm5cP41230 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Kdm5cP41230 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Gm11661-201ENSMUST00000121761 1327 ntBASIC21.13■□□□□ 0.97
Kdm5cP41230 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC21.13■□□□□ 0.97
Kdm5cP41230 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Gm19078-201ENSMUST00000206311 727 ntBASIC21.13■□□□□ 0.97
Kdm5cP41230 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Kdm5cP41230 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Kdm5cP41230 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Kdm5cP41230 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Kdm5cP41230 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Gm27514-201ENSMUST00000183692 110 ntBASIC21.12■□□□□ 0.97
Kdm5cP41230 Gm38230-201ENSMUST00000193572 1159 ntBASIC21.12■□□□□ 0.97
Kdm5cP41230 AL645783.1-201ENSMUST00000221416 1832 ntBASIC21.12■□□□□ 0.97
Kdm5cP41230 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.12■□□□□ 0.97
Kdm5cP41230 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Kdm5cP41230 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm5cP41230 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Kdm5cP41230 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Kdm5cP41230 Gm15376-201ENSMUST00000122258 783 ntBASIC21.11■□□□□ 0.97
Kdm5cP41230 Gm8652-201ENSMUST00000181363 964 ntBASIC21.11■□□□□ 0.97
Kdm5cP41230 Gm27486-201ENSMUST00000184923 80 ntBASIC21.11■□□□□ 0.97
Kdm5cP41230 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms