Protein–RNA interactions for Protein: W4VSP7

Gm3238, MCG61407, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3238W4VSP7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm3238W4VSP7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm3238W4VSP7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm3238W4VSP7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.87■□□□□ 0.29
Gm3238W4VSP7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3238W4VSP7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm3238W4VSP7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3238W4VSP7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3238W4VSP7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3238W4VSP7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3238W4VSP7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm3238W4VSP7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3238W4VSP7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3238W4VSP7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.83■□□□□ 0.28
Gm3238W4VSP7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm3238W4VSP7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3238W4VSP7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3238W4VSP7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3238W4VSP7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm3238W4VSP7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3238W4VSP7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3238W4VSP7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm3238W4VSP7 Gm9847-201ENSMUST00000052528 599 ntBASIC16.82■□□□□ 0.28
Gm3238W4VSP7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3238W4VSP7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3238W4VSP7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3238W4VSP7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3238W4VSP7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm3238W4VSP7 Gm10232-201ENSMUST00000089221 720 ntBASIC16.8■□□□□ 0.28
Gm3238W4VSP7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3238W4VSP7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3238W4VSP7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3238W4VSP7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.79■□□□□ 0.28
Gm3238W4VSP7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm3238W4VSP7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.79■□□□□ 0.28
Gm3238W4VSP7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3238W4VSP7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3238W4VSP7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3238W4VSP7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3238W4VSP7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3238W4VSP7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3238W4VSP7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3238W4VSP7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Gm3238W4VSP7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm3238W4VSP7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm3238W4VSP7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm3238W4VSP7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm3238W4VSP7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm3238W4VSP7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.75■□□□□ 0.27
Gm3238W4VSP7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm3238W4VSP7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm3238W4VSP7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm3238W4VSP7 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.75■□□□□ 0.27
Gm3238W4VSP7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm3238W4VSP7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm3238W4VSP7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm3238W4VSP7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm3238W4VSP7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm3238W4VSP7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3238W4VSP7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3238W4VSP7 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.73■□□□□ 0.27
Gm3238W4VSP7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3238W4VSP7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3238W4VSP7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3238W4VSP7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3238W4VSP7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3238W4VSP7 Amer2-203ENSMUST00000225247 2662 ntBASIC16.72■□□□□ 0.27
Gm3238W4VSP7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3238W4VSP7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3238W4VSP7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3238W4VSP7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3238W4VSP7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Gm3238W4VSP7 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.7■□□□□ 0.26
Gm3238W4VSP7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.7■□□□□ 0.26
Gm3238W4VSP7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm3238W4VSP7 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.7■□□□□ 0.26
Gm3238W4VSP7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms