Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClcnkaQ9WUB7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.4■□□□□ 0.86
ClcnkaQ9WUB7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClcnkaQ9WUB7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ClcnkaQ9WUB7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ClcnkaQ9WUB7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.39■□□□□ 0.86
ClcnkaQ9WUB7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ClcnkaQ9WUB7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ClcnkaQ9WUB7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ClcnkaQ9WUB7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Scarna2-201ENSMUST00000157560 414 ntBASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ClcnkaQ9WUB7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClcnkaQ9WUB7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClcnkaQ9WUB7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClcnkaQ9WUB7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClcnkaQ9WUB7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
ClcnkaQ9WUB7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClcnkaQ9WUB7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ClcnkaQ9WUB7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClcnkaQ9WUB7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClcnkaQ9WUB7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ClcnkaQ9WUB7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ClcnkaQ9WUB7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClcnkaQ9WUB7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClcnkaQ9WUB7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClcnkaQ9WUB7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ClcnkaQ9WUB7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Gm11687-201ENSMUST00000118911 886 ntBASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ClcnkaQ9WUB7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ClcnkaQ9WUB7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms