Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.58■□□□□ 0.72
Tmem54Q9D7S1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.58■□□□□ 0.72
Tmem54Q9D7S1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem54Q9D7S1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem54Q9D7S1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tmem54Q9D7S1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem54Q9D7S1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.57■□□□□ 0.72
Tmem54Q9D7S1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem54Q9D7S1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem54Q9D7S1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem54Q9D7S1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tmem54Q9D7S1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem54Q9D7S1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem54Q9D7S1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem54Q9D7S1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem54Q9D7S1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem54Q9D7S1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tmem54Q9D7S1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tmem54Q9D7S1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem54Q9D7S1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem54Q9D7S1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem54Q9D7S1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tmem54Q9D7S1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.51■□□□□ 0.71
Tmem54Q9D7S1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem54Q9D7S1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem54Q9D7S1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.49■□□□□ 0.71
Tmem54Q9D7S1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem54Q9D7S1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem54Q9D7S1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Tmem54Q9D7S1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tmem54Q9D7S1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tmem54Q9D7S1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.47■□□□□ 0.71
Tmem54Q9D7S1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Cap2-205ENSMUST00000225824 1634 ntBASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem54Q9D7S1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tmem54Q9D7S1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem54Q9D7S1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem54Q9D7S1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.44■□□□□ 0.7
Tmem54Q9D7S1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.44■□□□□ 0.7
Tmem54Q9D7S1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem54Q9D7S1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem54Q9D7S1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem54Q9D7S1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.43■□□□□ 0.7
Tmem54Q9D7S1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem54Q9D7S1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tmem54Q9D7S1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem54Q9D7S1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms