Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Gm26115-201ENSMUST00000175605 87 ntBASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShpkQ9D5J6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShpkQ9D5J6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ShpkQ9D5J6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ShpkQ9D5J6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShpkQ9D5J6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShpkQ9D5J6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShpkQ9D5J6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ShpkQ9D5J6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShpkQ9D5J6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ShpkQ9D5J6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShpkQ9D5J6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShpkQ9D5J6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShpkQ9D5J6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShpkQ9D5J6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShpkQ9D5J6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShpkQ9D5J6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShpkQ9D5J6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShpkQ9D5J6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShpkQ9D5J6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShpkQ9D5J6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.68■□□□□ 0.58
ShpkQ9D5J6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShpkQ9D5J6 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.68■□□□□ 0.58
ShpkQ9D5J6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShpkQ9D5J6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ShpkQ9D5J6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShpkQ9D5J6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.67■□□□□ 0.58
ShpkQ9D5J6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShpkQ9D5J6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ShpkQ9D5J6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ShpkQ9D5J6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.64■□□□□ 0.58
ShpkQ9D5J6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ShpkQ9D5J6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShpkQ9D5J6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ShpkQ9D5J6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShpkQ9D5J6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ShpkQ9D5J6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ShpkQ9D5J6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ShpkQ9D5J6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.62■□□□□ 0.57
ShpkQ9D5J6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ShpkQ9D5J6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ShpkQ9D5J6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShpkQ9D5J6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ShpkQ9D5J6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShpkQ9D5J6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ShpkQ9D5J6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ShpkQ9D5J6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ShpkQ9D5J6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShpkQ9D5J6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ShpkQ9D5J6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ShpkQ9D5J6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ShpkQ9D5J6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ShpkQ9D5J6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShpkQ9D5J6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShpkQ9D5J6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ShpkQ9D5J6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShpkQ9D5J6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShpkQ9D5J6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ShpkQ9D5J6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ShpkQ9D5J6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShpkQ9D5J6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms