Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mrpl35Q9CQL6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mrpl35Q9CQL6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mrpl35Q9CQL6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.41■□□□□ 0.22
Mrpl35Q9CQL6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl35Q9CQL6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl35Q9CQL6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl35Q9CQL6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.4■□□□□ 0.22
Mrpl35Q9CQL6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl35Q9CQL6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl35Q9CQL6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Gm27502-201ENSMUST00000183495 199 ntBASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Mrpl35Q9CQL6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl35Q9CQL6 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.36■□□□□ 0.21
Mrpl35Q9CQL6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mrpl35Q9CQL6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mrpl35Q9CQL6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mrpl35Q9CQL6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.34■□□□□ 0.21
Mrpl35Q9CQL6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.34■□□□□ 0.21
Mrpl35Q9CQL6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mrpl35Q9CQL6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mrpl35Q9CQL6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mrpl35Q9CQL6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.33■□□□□ 0.2
Mrpl35Q9CQL6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.33■□□□□ 0.2
Mrpl35Q9CQL6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.33■□□□□ 0.2
Mrpl35Q9CQL6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mrpl35Q9CQL6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mrpl35Q9CQL6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mrpl35Q9CQL6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mrpl35Q9CQL6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mrpl35Q9CQL6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Cap2-205ENSMUST00000225824 1634 ntBASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mrpl35Q9CQL6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mrpl35Q9CQL6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Gm12366-201ENSMUST00000121722 873 ntBASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Gm5786-201ENSMUST00000085368 882 ntBASIC16.29■□□□□ 0.2
Mrpl35Q9CQL6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Mrpl35Q9CQL6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mrpl35Q9CQL6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mrpl35Q9CQL6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.28■□□□□ 0.2
Mrpl35Q9CQL6 Gm44428-201ENSMUST00000204474 874 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms