Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkd1Q99MH6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.93■□□□□ 0.94
Nkd1Q99MH6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkd1Q99MH6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkd1Q99MH6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkd1Q99MH6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Nkd1Q99MH6 Gm8503-201ENSMUST00000118131 455 ntBASIC20.91■□□□□ 0.94
Nkd1Q99MH6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkd1Q99MH6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkd1Q99MH6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkd1Q99MH6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkd1Q99MH6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.9■□□□□ 0.94
Nkd1Q99MH6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkd1Q99MH6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nkd1Q99MH6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.89■□□□□ 0.93
Nkd1Q99MH6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkd1Q99MH6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nkd1Q99MH6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkd1Q99MH6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkd1Q99MH6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkd1Q99MH6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nkd1Q99MH6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkd1Q99MH6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkd1Q99MH6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkd1Q99MH6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkd1Q99MH6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkd1Q99MH6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkd1Q99MH6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Nkd1Q99MH6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkd1Q99MH6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkd1Q99MH6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkd1Q99MH6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.84■□□□□ 0.93
Nkd1Q99MH6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nkd1Q99MH6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkd1Q99MH6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nkd1Q99MH6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkd1Q99MH6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nkd1Q99MH6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkd1Q99MH6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nkd1Q99MH6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkd1Q99MH6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Nkd1Q99MH6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Gm4799-201ENSMUST00000095396 657 ntBASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkd1Q99MH6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkd1Q99MH6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkd1Q99MH6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.79■□□□□ 0.92
Nkd1Q99MH6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.79■□□□□ 0.92
Nkd1Q99MH6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.79■□□□□ 0.92
Nkd1Q99MH6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkd1Q99MH6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nkd1Q99MH6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkd1Q99MH6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.78■□□□□ 0.92
Nkd1Q99MH6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkd1Q99MH6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkd1Q99MH6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkd1Q99MH6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Nkd1Q99MH6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms