Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb2Q91Y00 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdhb2Q91Y00 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.67■■□□□ 1.38
Pcdhb2Q91Y00 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb2Q91Y00 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb2Q91Y00 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb2Q91Y00 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb2Q91Y00 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb2Q91Y00 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb2Q91Y00 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhb2Q91Y00 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.64■■□□□ 1.37
Pcdhb2Q91Y00 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb2Q91Y00 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.64■■□□□ 1.37
Pcdhb2Q91Y00 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb2Q91Y00 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb2Q91Y00 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb2Q91Y00 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb2Q91Y00 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb2Q91Y00 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb2Q91Y00 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb2Q91Y00 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb2Q91Y00 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb2Q91Y00 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb2Q91Y00 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb2Q91Y00 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdhb2Q91Y00 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb2Q91Y00 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb2Q91Y00 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb2Q91Y00 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb2Q91Y00 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb2Q91Y00 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb2Q91Y00 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb2Q91Y00 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb2Q91Y00 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb2Q91Y00 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb2Q91Y00 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb2Q91Y00 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb2Q91Y00 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb2Q91Y00 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb2Q91Y00 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb2Q91Y00 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb2Q91Y00 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb2Q91Y00 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb2Q91Y00 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb2Q91Y00 Gm10420-201ENSMUST00000121713 882 ntBASIC23.51■■□□□ 1.35
Pcdhb2Q91Y00 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb2Q91Y00 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb2Q91Y00 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb2Q91Y00 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb2Q91Y00 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb2Q91Y00 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb2Q91Y00 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.49■■□□□ 1.35
Pcdhb2Q91Y00 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb2Q91Y00 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.49■■□□□ 1.35
Pcdhb2Q91Y00 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb2Q91Y00 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb2Q91Y00 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.48■■□□□ 1.35
Pcdhb2Q91Y00 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pcdhb2Q91Y00 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb2Q91Y00 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb2Q91Y00 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb2Q91Y00 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
Pcdhb2Q91Y00 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Pcdhb2Q91Y00 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms