Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgb1Q91XX8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgb1Q91XX8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgb1Q91XX8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgb1Q91XX8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb1Q91XX8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb1Q91XX8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb1Q91XX8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Pcdhgb1Q91XX8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb1Q91XX8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgb1Q91XX8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgb1Q91XX8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdhgb1Q91XX8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.17■■□□□ 1.3
Pcdhgb1Q91XX8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhgb1Q91XX8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhgb1Q91XX8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb1Q91XX8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Pcdhgb1Q91XX8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb1Q91XX8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhgb1Q91XX8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhgb1Q91XX8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhgb1Q91XX8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhgb1Q91XX8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb1Q91XX8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb1Q91XX8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Pcdhgb1Q91XX8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb1Q91XX8 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.1■■□□□ 1.29
Pcdhgb1Q91XX8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb1Q91XX8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb1Q91XX8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Pcdhgb1Q91XX8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhgb1Q91XX8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb1Q91XX8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb1Q91XX8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.08■■□□□ 1.29
Pcdhgb1Q91XX8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb1Q91XX8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb1Q91XX8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhgb1Q91XX8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhgb1Q91XX8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb1Q91XX8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb1Q91XX8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhgb1Q91XX8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Pcdhgb1Q91XX8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb1Q91XX8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb1Q91XX8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhgb1Q91XX8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhgb1Q91XX8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb1Q91XX8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb1Q91XX8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb1Q91XX8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhgb1Q91XX8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhgb1Q91XX8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb1Q91XX8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb1Q91XX8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb1Q91XX8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 Gm5921-201ENSMUST00000075898 882 ntBASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb1Q91XX8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb1Q91XX8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb1Q91XX8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb1Q91XX8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhgb1Q91XX8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb1Q91XX8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb1Q91XX8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb1Q91XX8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.99■■□□□ 1.27
Pcdhgb1Q91XX8 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.99■■□□□ 1.27
Pcdhgb1Q91XX8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb1Q91XX8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb1Q91XX8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb1Q91XX8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb1Q91XX8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb1Q91XX8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb1Q91XX8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms