Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab40cQ8VHQ4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rab40cQ8VHQ4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40cQ8VHQ4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.2■□□□□ 0.5
Rab40cQ8VHQ4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40cQ8VHQ4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab40cQ8VHQ4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rab40cQ8VHQ4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.19■□□□□ 0.5
Rab40cQ8VHQ4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rab40cQ8VHQ4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40cQ8VHQ4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab40cQ8VHQ4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab40cQ8VHQ4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40cQ8VHQ4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40cQ8VHQ4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40cQ8VHQ4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40cQ8VHQ4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab40cQ8VHQ4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rab40cQ8VHQ4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab40cQ8VHQ4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Rab40cQ8VHQ4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab40cQ8VHQ4 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.15■□□□□ 0.5
Rab40cQ8VHQ4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rab40cQ8VHQ4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rab40cQ8VHQ4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab40cQ8VHQ4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rab40cQ8VHQ4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40cQ8VHQ4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab40cQ8VHQ4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.12■□□□□ 0.49
Rab40cQ8VHQ4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40cQ8VHQ4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40cQ8VHQ4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab40cQ8VHQ4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab40cQ8VHQ4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.1■□□□□ 0.49
Rab40cQ8VHQ4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab40cQ8VHQ4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab40cQ8VHQ4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab40cQ8VHQ4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Rab40cQ8VHQ4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
Rab40cQ8VHQ4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rab40cQ8VHQ4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rab40cQ8VHQ4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Rab40cQ8VHQ4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rab40cQ8VHQ4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rab40cQ8VHQ4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab40cQ8VHQ4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab40cQ8VHQ4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.05■□□□□ 0.48
Rab40cQ8VHQ4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40cQ8VHQ4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40cQ8VHQ4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab40cQ8VHQ4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab40cQ8VHQ4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rab40cQ8VHQ4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms