Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ccdc65Q8VHI7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ccdc65Q8VHI7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ccdc65Q8VHI7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ccdc65Q8VHI7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.42■■□□□ 1.34
Ccdc65Q8VHI7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ccdc65Q8VHI7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 Terc-201ENSMUST00000082862 423 ntBASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ccdc65Q8VHI7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Ccdc65Q8VHI7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ccdc65Q8VHI7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ccdc65Q8VHI7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ccdc65Q8VHI7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.39■■□□□ 1.34
Ccdc65Q8VHI7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Ccdc65Q8VHI7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ccdc65Q8VHI7 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.39■■□□□ 1.34
Ccdc65Q8VHI7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ccdc65Q8VHI7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc65Q8VHI7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc65Q8VHI7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc65Q8VHI7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.38■■□□□ 1.33
Ccdc65Q8VHI7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.38■■□□□ 1.33
Ccdc65Q8VHI7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc65Q8VHI7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc65Q8VHI7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc65Q8VHI7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.35■■□□□ 1.33
Ccdc65Q8VHI7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc65Q8VHI7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ccdc65Q8VHI7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc65Q8VHI7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc65Q8VHI7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.33■■□□□ 1.33
Ccdc65Q8VHI7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ccdc65Q8VHI7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ccdc65Q8VHI7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Ccdc65Q8VHI7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.31■■□□□ 1.32
Ccdc65Q8VHI7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc65Q8VHI7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.3■■□□□ 1.32
Ccdc65Q8VHI7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc65Q8VHI7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc65Q8VHI7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc65Q8VHI7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Scarna2-201ENSMUST00000157560 414 ntBASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc65Q8VHI7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc65Q8VHI7 Gm9806-201ENSMUST00000051080 552 ntBASIC23.27■■□□□ 1.32
Ccdc65Q8VHI7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc65Q8VHI7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ccdc65Q8VHI7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.26■■□□□ 1.31
Ccdc65Q8VHI7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms