Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln1Q8R317 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubqln1Q8R317 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ubqln1Q8R317 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubqln1Q8R317 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubqln1Q8R317 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln1Q8R317 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln1Q8R317 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Gm16437-201ENSMUST00000025669 507 ntBASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln1Q8R317 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 Gm11687-201ENSMUST00000118911 886 ntBASIC20.98■□□□□ 0.95
Ubqln1Q8R317 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubqln1Q8R317 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln1Q8R317 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubqln1Q8R317 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubqln1Q8R317 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.96■□□□□ 0.95
Ubqln1Q8R317 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Ubqln1Q8R317 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln1Q8R317 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln1Q8R317 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln1Q8R317 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ubqln1Q8R317 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ubqln1Q8R317 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ubqln1Q8R317 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln1Q8R317 Gm44428-201ENSMUST00000204474 874 ntBASIC20.91■□□□□ 0.94
Ubqln1Q8R317 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubqln1Q8R317 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubqln1Q8R317 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.89■□□□□ 0.94
Ubqln1Q8R317 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.89■□□□□ 0.94
Ubqln1Q8R317 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ubqln1Q8R317 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubqln1Q8R317 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubqln1Q8R317 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ubqln1Q8R317 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubqln1Q8R317 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubqln1Q8R317 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ubqln1Q8R317 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ubqln1Q8R317 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubqln1Q8R317 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubqln1Q8R317 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubqln1Q8R317 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubqln1Q8R317 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms