Protein–RNA interactions for Protein: Q8R1Z4

Ppp1r42, Protein phosphatase 1 regulatory subunit 42, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r42Q8R1Z4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.64■■■□□ 2.02
Ppp1r42Q8R1Z4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Ppp1r42Q8R1Z4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ppp1r42Q8R1Z4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Ppp1r42Q8R1Z4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Ppp1r42Q8R1Z4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Ppp1r42Q8R1Z4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Ppp1r42Q8R1Z4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.63■■■□□ 2.01
Ppp1r42Q8R1Z4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ppp1r42Q8R1Z4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ppp1r42Q8R1Z4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ppp1r42Q8R1Z4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ppp1r42Q8R1Z4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ppp1r42Q8R1Z4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Il17rd-202ENSMUST00000223942 2186 ntBASIC27.59■■■□□ 2.01
Ppp1r42Q8R1Z4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ppp1r42Q8R1Z4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ppp1r42Q8R1Z4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
Ppp1r42Q8R1Z4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Gm12366-201ENSMUST00000121722 873 ntBASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Gm5786-201ENSMUST00000085368 882 ntBASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Ppp1r42Q8R1Z4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ppp1r42Q8R1Z4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.56■■■□□ 2
Ppp1r42Q8R1Z4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ppp1r42Q8R1Z4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Ppp1r42Q8R1Z4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.56■■■□□ 2
Ppp1r42Q8R1Z4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.55■■■□□ 2
Ppp1r42Q8R1Z4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ppp1r42Q8R1Z4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ppp1r42Q8R1Z4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ppp1r42Q8R1Z4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.55■■■□□ 2
Ppp1r42Q8R1Z4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Ppp1r42Q8R1Z4 Gm14523-201ENSMUST00000117260 558 ntBASIC27.54■■■□□ 2
Ppp1r42Q8R1Z4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.54■■■□□ 2
Ppp1r42Q8R1Z4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ppp1r42Q8R1Z4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Ppp1r42Q8R1Z4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Ppp1r42Q8R1Z4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Ppp1r42Q8R1Z4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.53■■■□□ 2
Ppp1r42Q8R1Z4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ppp1r42Q8R1Z4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.52■■■□□ 2
Ppp1r42Q8R1Z4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ppp1r42Q8R1Z4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Ppp1r42Q8R1Z4 Cap2-205ENSMUST00000225824 1634 ntBASIC27.52■■■□□ 2
Ppp1r42Q8R1Z4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ppp1r42Q8R1Z4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Ppp1r42Q8R1Z4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ppp1r42Q8R1Z4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.51■■□□□ 1.99
Ppp1r42Q8R1Z4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ppp1r42Q8R1Z4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Ppp1r42Q8R1Z4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
Ppp1r42Q8R1Z4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ppp1r42Q8R1Z4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Ppp1r42Q8R1Z4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ppp1r42Q8R1Z4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Ppp1r42Q8R1Z4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ppp1r42Q8R1Z4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ppp1r42Q8R1Z4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Gm7332-201ENSMUST00000118351 454 ntBASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.46■■□□□ 1.99
Ppp1r42Q8R1Z4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ppp1r42Q8R1Z4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ppp1r42Q8R1Z4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Ppp1r42Q8R1Z4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.45■■□□□ 1.98
Ppp1r42Q8R1Z4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ppp1r42Q8R1Z4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Ppp1r42Q8R1Z4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ppp1r42Q8R1Z4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ppp1r42Q8R1Z4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ppp1r42Q8R1Z4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ppp1r42Q8R1Z4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ppp1r42Q8R1Z4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.42■■□□□ 1.98
Ppp1r42Q8R1Z4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ppp1r42Q8R1Z4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms