Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpp40Q8R1F9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rpp40Q8R1F9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rpp40Q8R1F9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rpp40Q8R1F9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rpp40Q8R1F9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpp40Q8R1F9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpp40Q8R1F9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rpp40Q8R1F9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpp40Q8R1F9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rpp40Q8R1F9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpp40Q8R1F9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rpp40Q8R1F9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rpp40Q8R1F9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Rpp40Q8R1F9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rpp40Q8R1F9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpp40Q8R1F9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpp40Q8R1F9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.05■■□□□ 1.44
Rpp40Q8R1F9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpp40Q8R1F9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rpp40Q8R1F9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rpp40Q8R1F9 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.04■■□□□ 1.44
Rpp40Q8R1F9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.04■■□□□ 1.44
Rpp40Q8R1F9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpp40Q8R1F9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.03■■□□□ 1.44
Rpp40Q8R1F9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpp40Q8R1F9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rpp40Q8R1F9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.02■■□□□ 1.44
Rpp40Q8R1F9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpp40Q8R1F9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.01■■□□□ 1.43
Rpp40Q8R1F9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rpp40Q8R1F9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rpp40Q8R1F9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpp40Q8R1F9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpp40Q8R1F9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Rpp40Q8R1F9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rpp40Q8R1F9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Rpp40Q8R1F9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rpp40Q8R1F9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rpp40Q8R1F9 Gm10420-201ENSMUST00000121713 882 ntBASIC23.96■■□□□ 1.43
Rpp40Q8R1F9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.96■■□□□ 1.43
Rpp40Q8R1F9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpp40Q8R1F9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rpp40Q8R1F9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpp40Q8R1F9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpp40Q8R1F9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpp40Q8R1F9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rpp40Q8R1F9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rpp40Q8R1F9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rpp40Q8R1F9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.94■■□□□ 1.42
Rpp40Q8R1F9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rpp40Q8R1F9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rpp40Q8R1F9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpp40Q8R1F9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rpp40Q8R1F9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpp40Q8R1F9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rpp40Q8R1F9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rpp40Q8R1F9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpp40Q8R1F9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpp40Q8R1F9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.9■■□□□ 1.42
Rpp40Q8R1F9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Rpp40Q8R1F9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rpp40Q8R1F9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rpp40Q8R1F9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Rpp40Q8R1F9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Rpp40Q8R1F9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rpp40Q8R1F9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rpp40Q8R1F9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rpp40Q8R1F9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.88■■□□□ 1.41
Rpp40Q8R1F9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rpp40Q8R1F9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.87■■□□□ 1.41
Rpp40Q8R1F9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpp40Q8R1F9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rpp40Q8R1F9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms