Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Sf3a1Q8K4Z5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Sf3a1Q8K4Z5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.26■■□□□ 1.95
Sf3a1Q8K4Z5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Sf3a1Q8K4Z5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Sf3a1Q8K4Z5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Sf3a1Q8K4Z5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.25■■□□□ 1.95
Sf3a1Q8K4Z5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Sf3a1Q8K4Z5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sf3a1Q8K4Z5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sf3a1Q8K4Z5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sf3a1Q8K4Z5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.24■■□□□ 1.95
Sf3a1Q8K4Z5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Sf3a1Q8K4Z5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sf3a1Q8K4Z5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sf3a1Q8K4Z5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Sf3a1Q8K4Z5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.22■■□□□ 1.95
Sf3a1Q8K4Z5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sf3a1Q8K4Z5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Gm12366-201ENSMUST00000121722 873 ntBASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Gm5786-201ENSMUST00000085368 882 ntBASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Sf3a1Q8K4Z5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Sf3a1Q8K4Z5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Sf3a1Q8K4Z5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.2■■□□□ 1.94
Sf3a1Q8K4Z5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Sf3a1Q8K4Z5 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.19■■□□□ 1.94
Sf3a1Q8K4Z5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Sf3a1Q8K4Z5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.19■■□□□ 1.94
Sf3a1Q8K4Z5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sf3a1Q8K4Z5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Sf3a1Q8K4Z5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.18■■□□□ 1.94
Sf3a1Q8K4Z5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Sf3a1Q8K4Z5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 Gm14523-201ENSMUST00000117260 558 ntBASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sf3a1Q8K4Z5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Sf3a1Q8K4Z5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.16■■□□□ 1.94
Sf3a1Q8K4Z5 Cap2-205ENSMUST00000225824 1634 ntBASIC27.16■■□□□ 1.94
Sf3a1Q8K4Z5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Sf3a1Q8K4Z5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC27.15■■□□□ 1.94
Sf3a1Q8K4Z5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Sf3a1Q8K4Z5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Sf3a1Q8K4Z5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.15■■□□□ 1.94
Sf3a1Q8K4Z5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Sf3a1Q8K4Z5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Sf3a1Q8K4Z5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Sf3a1Q8K4Z5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Sf3a1Q8K4Z5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Sf3a1Q8K4Z5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Sf3a1Q8K4Z5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Sf3a1Q8K4Z5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.12■■□□□ 1.93
Sf3a1Q8K4Z5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Sf3a1Q8K4Z5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Sf3a1Q8K4Z5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Sf3a1Q8K4Z5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
Sf3a1Q8K4Z5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Sf3a1Q8K4Z5 Gm7332-201ENSMUST00000118351 454 ntBASIC27.1■■□□□ 1.93
Sf3a1Q8K4Z5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.1■■□□□ 1.93
Sf3a1Q8K4Z5 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.1■■□□□ 1.93
Sf3a1Q8K4Z5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Sf3a1Q8K4Z5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Sf3a1Q8K4Z5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sf3a1Q8K4Z5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sf3a1Q8K4Z5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Sf3a1Q8K4Z5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sf3a1Q8K4Z5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.06■■□□□ 1.92
Sf3a1Q8K4Z5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Sf3a1Q8K4Z5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.06■■□□□ 1.92
Sf3a1Q8K4Z5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.06■■□□□ 1.92
Sf3a1Q8K4Z5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.06■■□□□ 1.92
Sf3a1Q8K4Z5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms