Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lrrtm1Q8K377 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrtm1Q8K377 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lrrtm1Q8K377 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrtm1Q8K377 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrtm1Q8K377 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrtm1Q8K377 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrtm1Q8K377 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrtm1Q8K377 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrtm1Q8K377 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrtm1Q8K377 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrtm1Q8K377 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrtm1Q8K377 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrtm1Q8K377 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrrtm1Q8K377 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lrrtm1Q8K377 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.97■□□□□ 0.63
Lrrtm1Q8K377 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrrtm1Q8K377 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrtm1Q8K377 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrtm1Q8K377 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrtm1Q8K377 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrtm1Q8K377 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrrtm1Q8K377 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrtm1Q8K377 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lrrtm1Q8K377 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Lrrtm1Q8K377 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrtm1Q8K377 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lrrtm1Q8K377 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrtm1Q8K377 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lrrtm1Q8K377 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Lrrtm1Q8K377 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Lrrtm1Q8K377 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.93■□□□□ 0.62
Lrrtm1Q8K377 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrtm1Q8K377 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrtm1Q8K377 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrtm1Q8K377 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lrrtm1Q8K377 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Nkain2-201ENSMUST00000092602 558 ntBASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lrrtm1Q8K377 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrtm1Q8K377 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lrrtm1Q8K377 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrtm1Q8K377 Notumos-201ENSMUST00000151998 2659 ntBASIC18.91■□□□□ 0.62
Lrrtm1Q8K377 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lrrtm1Q8K377 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrtm1Q8K377 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrtm1Q8K377 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrtm1Q8K377 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lrrtm1Q8K377 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lrrtm1Q8K377 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lrrtm1Q8K377 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.89■□□□□ 0.62
Lrrtm1Q8K377 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Gm37136-201ENSMUST00000194368 194 ntBASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrrtm1Q8K377 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Lrrtm1Q8K377 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrtm1Q8K377 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lrrtm1Q8K377 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.87■□□□□ 0.61
Lrrtm1Q8K377 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lrrtm1Q8K377 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrrtm1Q8K377 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lrrtm1Q8K377 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lrrtm1Q8K377 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrrtm1Q8K377 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.86■□□□□ 0.61
Lrrtm1Q8K377 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Lrrtm1Q8K377 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Lrrtm1Q8K377 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms