Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Pcf11-205ENSMUST00000208255 1720 ntBASIC13.93□□□□□ -0.18
Cystm1Q8K353 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cystm1Q8K353 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cystm1Q8K353 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cystm1Q8K353 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cystm1Q8K353 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cystm1Q8K353 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cystm1Q8K353 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.9□□□□□ -0.18
Cystm1Q8K353 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cystm1Q8K353 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cystm1Q8K353 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cystm1Q8K353 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cystm1Q8K353 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cystm1Q8K353 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cystm1Q8K353 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cystm1Q8K353 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cystm1Q8K353 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC13.89□□□□□ -0.19
Cystm1Q8K353 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cystm1Q8K353 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Gm6821-201ENSMUST00000107540 542 ntBASIC13.88□□□□□ -0.19
Cystm1Q8K353 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cystm1Q8K353 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cystm1Q8K353 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cystm1Q8K353 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cystm1Q8K353 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Cystm1Q8K353 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cystm1Q8K353 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cystm1Q8K353 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.86□□□□□ -0.19
Cystm1Q8K353 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cystm1Q8K353 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cystm1Q8K353 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cystm1Q8K353 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC13.85□□□□□ -0.19
Cystm1Q8K353 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cystm1Q8K353 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cystm1Q8K353 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cystm1Q8K353 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cystm1Q8K353 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cystm1Q8K353 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cystm1Q8K353 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cystm1Q8K353 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cystm1Q8K353 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.82□□□□□ -0.2
Cystm1Q8K353 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.81□□□□□ -0.2
Cystm1Q8K353 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cystm1Q8K353 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cystm1Q8K353 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cystm1Q8K353 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 182.6 ms