Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Uba3Q8C878 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Uba3Q8C878 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Uba3Q8C878 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.52■■□□□ 1.36
Uba3Q8C878 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Uba3Q8C878 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Uba3Q8C878 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Uba3Q8C878 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Uba3Q8C878 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Uba3Q8C878 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.5■■□□□ 1.35
Uba3Q8C878 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Uba3Q8C878 Gm44428-201ENSMUST00000204474 874 ntBASIC23.5■■□□□ 1.35
Uba3Q8C878 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.5■■□□□ 1.35
Uba3Q8C878 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Uba3Q8C878 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
Uba3Q8C878 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Uba3Q8C878 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Uba3Q8C878 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Uba3Q8C878 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Uba3Q8C878 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Uba3Q8C878 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Uba3Q8C878 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Uba3Q8C878 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Uba3Q8C878 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Uba3Q8C878 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Uba3Q8C878 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Uba3Q8C878 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Uba3Q8C878 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.47■■□□□ 1.35
Uba3Q8C878 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Uba3Q8C878 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Uba3Q8C878 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Uba3Q8C878 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Uba3Q8C878 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Uba3Q8C878 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Uba3Q8C878 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Uba3Q8C878 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.45■■□□□ 1.35
Uba3Q8C878 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Uba3Q8C878 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Uba3Q8C878 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.45■■□□□ 1.34
Uba3Q8C878 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.45■■□□□ 1.34
Uba3Q8C878 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Uba3Q8C878 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.44■■□□□ 1.34
Uba3Q8C878 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Uba3Q8C878 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.43■■□□□ 1.34
Uba3Q8C878 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.43■■□□□ 1.34
Uba3Q8C878 Gm12366-201ENSMUST00000121722 873 ntBASIC23.43■■□□□ 1.34
Uba3Q8C878 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.43■■□□□ 1.34
Uba3Q8C878 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Uba3Q8C878 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.43■■□□□ 1.34
Uba3Q8C878 Gm5786-201ENSMUST00000085368 882 ntBASIC23.43■■□□□ 1.34
Uba3Q8C878 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Uba3Q8C878 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Uba3Q8C878 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Uba3Q8C878 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.42■■□□□ 1.34
Uba3Q8C878 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Uba3Q8C878 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.42■■□□□ 1.34
Uba3Q8C878 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.42■■□□□ 1.34
Uba3Q8C878 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Uba3Q8C878 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uba3Q8C878 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Uba3Q8C878 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uba3Q8C878 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.41■■□□□ 1.34
Uba3Q8C878 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Uba3Q8C878 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uba3Q8C878 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Uba3Q8C878 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Uba3Q8C878 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Uba3Q8C878 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.4■■□□□ 1.34
Uba3Q8C878 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.4■■□□□ 1.34
Uba3Q8C878 Cap2-205ENSMUST00000225824 1634 ntBASIC23.4■■□□□ 1.34
Uba3Q8C878 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Uba3Q8C878 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Uba3Q8C878 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.39■■□□□ 1.34
Uba3Q8C878 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Uba3Q8C878 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Uba3Q8C878 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.39■■□□□ 1.33
Uba3Q8C878 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Uba3Q8C878 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Uba3Q8C878 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Uba3Q8C878 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Uba3Q8C878 Gm14523-201ENSMUST00000117260 558 ntBASIC23.38■■□□□ 1.33
Uba3Q8C878 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Uba3Q8C878 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Uba3Q8C878 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Uba3Q8C878 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.36■■□□□ 1.33
Uba3Q8C878 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Uba3Q8C878 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Uba3Q8C878 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
Uba3Q8C878 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uba3Q8C878 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uba3Q8C878 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uba3Q8C878 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Uba3Q8C878 Gm7332-201ENSMUST00000118351 454 ntBASIC23.34■■□□□ 1.33
Uba3Q8C878 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Uba3Q8C878 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms