Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Brat1Q8C3R1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Brat1Q8C3R1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Brat1Q8C3R1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Brat1Q8C3R1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.63■■□□□ 1.37
Brat1Q8C3R1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Brat1Q8C3R1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Brat1Q8C3R1 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.61■■□□□ 1.37
Brat1Q8C3R1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Brat1Q8C3R1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Brat1Q8C3R1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Brat1Q8C3R1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Brat1Q8C3R1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Brat1Q8C3R1 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.59■■□□□ 1.37
Brat1Q8C3R1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Brat1Q8C3R1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Brat1Q8C3R1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Brat1Q8C3R1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Brat1Q8C3R1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Brat1Q8C3R1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.57■■□□□ 1.36
Brat1Q8C3R1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Brat1Q8C3R1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Brat1Q8C3R1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Brat1Q8C3R1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Brat1Q8C3R1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Brat1Q8C3R1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Brat1Q8C3R1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Brat1Q8C3R1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Brat1Q8C3R1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Brat1Q8C3R1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Brat1Q8C3R1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Brat1Q8C3R1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Brat1Q8C3R1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.54■■□□□ 1.36
Brat1Q8C3R1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Brat1Q8C3R1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.53■■□□□ 1.36
Brat1Q8C3R1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Brat1Q8C3R1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Brat1Q8C3R1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Brat1Q8C3R1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Brat1Q8C3R1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Brat1Q8C3R1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Brat1Q8C3R1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Brat1Q8C3R1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Brat1Q8C3R1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Brat1Q8C3R1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Brat1Q8C3R1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Brat1Q8C3R1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.49■■□□□ 1.35
Brat1Q8C3R1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Brat1Q8C3R1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Brat1Q8C3R1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Brat1Q8C3R1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Brat1Q8C3R1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Brat1Q8C3R1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.48■■□□□ 1.35
Brat1Q8C3R1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Brat1Q8C3R1 Gm10420-201ENSMUST00000121713 882 ntBASIC23.47■■□□□ 1.35
Brat1Q8C3R1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Brat1Q8C3R1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Brat1Q8C3R1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Brat1Q8C3R1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Brat1Q8C3R1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.45■■□□□ 1.34
Brat1Q8C3R1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Brat1Q8C3R1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Brat1Q8C3R1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Brat1Q8C3R1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.43■■□□□ 1.34
Brat1Q8C3R1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Brat1Q8C3R1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
Brat1Q8C3R1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Brat1Q8C3R1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Brat1Q8C3R1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Brat1Q8C3R1 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.42■■□□□ 1.34
Brat1Q8C3R1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Brat1Q8C3R1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Brat1Q8C3R1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Brat1Q8C3R1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Brat1Q8C3R1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Brat1Q8C3R1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Brat1Q8C3R1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Brat1Q8C3R1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms