Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.59■□□□□ 0.57
Smim4Q8C1Q6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Smim4Q8C1Q6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smim4Q8C1Q6 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.58■□□□□ 0.57
Smim4Q8C1Q6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smim4Q8C1Q6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim4Q8C1Q6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.56■□□□□ 0.56
Smim4Q8C1Q6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smim4Q8C1Q6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smim4Q8C1Q6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.56■□□□□ 0.56
Smim4Q8C1Q6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smim4Q8C1Q6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smim4Q8C1Q6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim4Q8C1Q6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smim4Q8C1Q6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim4Q8C1Q6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Smim4Q8C1Q6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smim4Q8C1Q6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smim4Q8C1Q6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smim4Q8C1Q6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim4Q8C1Q6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smim4Q8C1Q6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim4Q8C1Q6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Gm9812-201ENSMUST00000061934 968 ntBASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smim4Q8C1Q6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Mir3960-201ENSMUST00000198213 73 ntBASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim4Q8C1Q6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim4Q8C1Q6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim4Q8C1Q6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim4Q8C1Q6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smim4Q8C1Q6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.46■□□□□ 0.55
Smim4Q8C1Q6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smim4Q8C1Q6 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.45■□□□□ 0.54
Smim4Q8C1Q6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim4Q8C1Q6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim4Q8C1Q6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smim4Q8C1Q6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.44■□□□□ 0.54
Smim4Q8C1Q6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim4Q8C1Q6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim4Q8C1Q6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms