Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cps1Q8C196 Gm9959-201ENSMUST00000068277 390 ntBASIC31.19■■■□□ 2.58
Cps1Q8C196 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Cps1Q8C196 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.18■■■□□ 2.58
Cps1Q8C196 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC31.18■■■□□ 2.58
Cps1Q8C196 Gm18755-201ENSMUST00000218030 1099 ntBASIC31.18■■■□□ 2.58
Cps1Q8C196 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cps1Q8C196 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Cps1Q8C196 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cps1Q8C196 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cps1Q8C196 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Cps1Q8C196 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cps1Q8C196 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Cps1Q8C196 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC31.15■■■□□ 2.58
Cps1Q8C196 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Cps1Q8C196 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cps1Q8C196 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC31.14■■■□□ 2.57
Cps1Q8C196 Gm42501-201ENSMUST00000200220 1026 ntBASIC31.14■■■□□ 2.57
Cps1Q8C196 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cps1Q8C196 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cps1Q8C196 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Cps1Q8C196 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cps1Q8C196 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Cps1Q8C196 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Cps1Q8C196 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC31.1■■■□□ 2.57
Cps1Q8C196 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cps1Q8C196 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Cps1Q8C196 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cps1Q8C196 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cps1Q8C196 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cps1Q8C196 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cps1Q8C196 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cps1Q8C196 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cps1Q8C196 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Cps1Q8C196 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cps1Q8C196 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cps1Q8C196 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC31.06■■■□□ 2.56
Cps1Q8C196 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cps1Q8C196 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cps1Q8C196 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cps1Q8C196 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cps1Q8C196 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cps1Q8C196 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Cps1Q8C196 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Cps1Q8C196 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cps1Q8C196 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cps1Q8C196 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cps1Q8C196 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cps1Q8C196 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cps1Q8C196 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cps1Q8C196 Gm10232-201ENSMUST00000089221 720 ntBASIC31.02■■■□□ 2.56
Cps1Q8C196 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.02■■■□□ 2.56
Cps1Q8C196 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cps1Q8C196 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Cps1Q8C196 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cps1Q8C196 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31■■■□□ 2.55
Cps1Q8C196 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cps1Q8C196 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC30.99■■■□□ 2.55
Cps1Q8C196 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cps1Q8C196 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Cps1Q8C196 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cps1Q8C196 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Cps1Q8C196 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cps1Q8C196 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC30.98■■■□□ 2.55
Cps1Q8C196 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cps1Q8C196 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Cps1Q8C196 Gm7199-201ENSMUST00000118327 1485 ntBASIC30.96■■■□□ 2.55
Cps1Q8C196 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cps1Q8C196 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cps1Q8C196 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cps1Q8C196 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.95■■■□□ 2.54
Cps1Q8C196 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cps1Q8C196 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Cps1Q8C196 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Cps1Q8C196 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cps1Q8C196 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Cps1Q8C196 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Cps1Q8C196 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cps1Q8C196 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.93■■■□□ 2.54
Cps1Q8C196 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Cps1Q8C196 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Cps1Q8C196 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
Cps1Q8C196 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cps1Q8C196 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cps1Q8C196 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Cps1Q8C196 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
Cps1Q8C196 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Cps1Q8C196 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC30.9■■■□□ 2.54
Cps1Q8C196 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC30.89■■■□□ 2.54
Cps1Q8C196 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cps1Q8C196 Gm5131-201ENSMUST00000212776 1238 ntBASIC30.88■■■□□ 2.53
Cps1Q8C196 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cps1Q8C196 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cps1Q8C196 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cps1Q8C196 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC30.88■■■□□ 2.53
Cps1Q8C196 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC30.88■■■□□ 2.53
Cps1Q8C196 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC30.87■■■□□ 2.53
Cps1Q8C196 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms