Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3rf3Q8C120 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.25■■□□□ 1.31
Sh3rf3Q8C120 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3rf3Q8C120 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.25■■□□□ 1.31
Sh3rf3Q8C120 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3rf3Q8C120 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf3Q8C120 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf3Q8C120 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf3Q8C120 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.22■■□□□ 1.31
Sh3rf3Q8C120 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.22■■□□□ 1.31
Sh3rf3Q8C120 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3rf3Q8C120 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
Sh3rf3Q8C120 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Sh3rf3Q8C120 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3rf3Q8C120 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3rf3Q8C120 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf3Q8C120 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3rf3Q8C120 Scarna2-201ENSMUST00000157560 414 ntBASIC23.18■■□□□ 1.3
Sh3rf3Q8C120 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3rf3Q8C120 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.18■■□□□ 1.3
Sh3rf3Q8C120 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3rf3Q8C120 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3rf3Q8C120 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf3Q8C120 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf3Q8C120 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.16■■□□□ 1.3
Sh3rf3Q8C120 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf3Q8C120 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3rf3Q8C120 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
Sh3rf3Q8C120 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Sh3rf3Q8C120 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3rf3Q8C120 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3rf3Q8C120 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3rf3Q8C120 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Sh3rf3Q8C120 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3rf3Q8C120 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Sh3rf3Q8C120 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3rf3Q8C120 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.13■■□□□ 1.29
Sh3rf3Q8C120 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3rf3Q8C120 Gm16437-201ENSMUST00000025669 507 ntBASIC23.13■■□□□ 1.29
Sh3rf3Q8C120 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3rf3Q8C120 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf3Q8C120 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Gm9806-201ENSMUST00000051080 552 ntBASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.11■■□□□ 1.29
Sh3rf3Q8C120 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf3Q8C120 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf3Q8C120 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Sh3rf3Q8C120 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf3Q8C120 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf3Q8C120 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf3Q8C120 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3rf3Q8C120 Gm11175-201ENSMUST00000116172 543 ntBASIC23.08■■□□□ 1.29
Sh3rf3Q8C120 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.08■■□□□ 1.29
Sh3rf3Q8C120 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3rf3Q8C120 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3rf3Q8C120 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.07■■□□□ 1.28
Sh3rf3Q8C120 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf3Q8C120 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms