Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc44a2Q8BY89 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Slc44a2Q8BY89 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc44a2Q8BY89 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc44a2Q8BY89 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc44a2Q8BY89 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Slc44a2Q8BY89 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc44a2Q8BY89 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc44a2Q8BY89 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc44a2Q8BY89 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc44a2Q8BY89 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Slc44a2Q8BY89 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc44a2Q8BY89 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc44a2Q8BY89 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc44a2Q8BY89 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc44a2Q8BY89 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc44a2Q8BY89 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc44a2Q8BY89 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.52■■□□□ 1.04
Slc44a2Q8BY89 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc44a2Q8BY89 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc44a2Q8BY89 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc44a2Q8BY89 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Slc44a2Q8BY89 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc44a2Q8BY89 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc44a2Q8BY89 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc44a2Q8BY89 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Slc44a2Q8BY89 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Slc44a2Q8BY89 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.49■■□□□ 1.03
Slc44a2Q8BY89 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc44a2Q8BY89 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc44a2Q8BY89 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.48■■□□□ 1.03
Slc44a2Q8BY89 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc44a2Q8BY89 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.46■■□□□ 1.03
Slc44a2Q8BY89 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc44a2Q8BY89 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.46■■□□□ 1.03
Slc44a2Q8BY89 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc44a2Q8BY89 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.45■■□□□ 1.02
Slc44a2Q8BY89 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.44■■□□□ 1.02
Slc44a2Q8BY89 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc44a2Q8BY89 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms