Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VmacQ8BP01 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VmacQ8BP01 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VmacQ8BP01 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VmacQ8BP01 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VmacQ8BP01 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
VmacQ8BP01 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.85■■□□□ 1.73
VmacQ8BP01 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.85■■□□□ 1.73
VmacQ8BP01 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VmacQ8BP01 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.84■■□□□ 1.73
VmacQ8BP01 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.84■■□□□ 1.73
VmacQ8BP01 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VmacQ8BP01 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VmacQ8BP01 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.84■■□□□ 1.73
VmacQ8BP01 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VmacQ8BP01 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VmacQ8BP01 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
VmacQ8BP01 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
VmacQ8BP01 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
VmacQ8BP01 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
VmacQ8BP01 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VmacQ8BP01 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
VmacQ8BP01 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.82■■□□□ 1.72
VmacQ8BP01 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
VmacQ8BP01 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
VmacQ8BP01 Mir6538-201ENSMUST00000183713 110 ntBASIC25.81■■□□□ 1.72
VmacQ8BP01 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
VmacQ8BP01 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
VmacQ8BP01 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.81■■□□□ 1.72
VmacQ8BP01 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
VmacQ8BP01 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VmacQ8BP01 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
VmacQ8BP01 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
VmacQ8BP01 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
VmacQ8BP01 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VmacQ8BP01 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VmacQ8BP01 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VmacQ8BP01 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VmacQ8BP01 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VmacQ8BP01 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
VmacQ8BP01 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
VmacQ8BP01 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.78■■□□□ 1.72
VmacQ8BP01 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VmacQ8BP01 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VmacQ8BP01 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VmacQ8BP01 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VmacQ8BP01 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VmacQ8BP01 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VmacQ8BP01 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.76■■□□□ 1.71
VmacQ8BP01 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
VmacQ8BP01 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
VmacQ8BP01 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
VmacQ8BP01 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.75■■□□□ 1.71
VmacQ8BP01 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VmacQ8BP01 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VmacQ8BP01 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
VmacQ8BP01 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VmacQ8BP01 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VmacQ8BP01 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.74■■□□□ 1.71
VmacQ8BP01 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VmacQ8BP01 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
VmacQ8BP01 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VmacQ8BP01 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VmacQ8BP01 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VmacQ8BP01 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VmacQ8BP01 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
VmacQ8BP01 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
VmacQ8BP01 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
VmacQ8BP01 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
VmacQ8BP01 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
VmacQ8BP01 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
VmacQ8BP01 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VmacQ8BP01 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VmacQ8BP01 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VmacQ8BP01 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.7■■□□□ 1.7
VmacQ8BP01 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.7■■□□□ 1.7
VmacQ8BP01 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
VmacQ8BP01 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VmacQ8BP01 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VmacQ8BP01 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
VmacQ8BP01 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VmacQ8BP01 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.69■■□□□ 1.7
VmacQ8BP01 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VmacQ8BP01 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
VmacQ8BP01 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VmacQ8BP01 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.68■■□□□ 1.7
VmacQ8BP01 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VmacQ8BP01 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
VmacQ8BP01 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VmacQ8BP01 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VmacQ8BP01 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VmacQ8BP01 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VmacQ8BP01 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VmacQ8BP01 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VmacQ8BP01 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VmacQ8BP01 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
VmacQ8BP01 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
VmacQ8BP01 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VmacQ8BP01 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.65■■□□□ 1.7
VmacQ8BP01 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms