Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf38Q8BI21 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf38Q8BI21 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.48■■□□□ 1.03
Rnf38Q8BI21 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf38Q8BI21 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf38Q8BI21 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf38Q8BI21 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf38Q8BI21 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf38Q8BI21 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rnf38Q8BI21 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf38Q8BI21 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf38Q8BI21 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf38Q8BI21 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.46■■□□□ 1.03
Rnf38Q8BI21 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf38Q8BI21 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf38Q8BI21 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf38Q8BI21 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf38Q8BI21 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.43■■□□□ 1.02
Rnf38Q8BI21 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
Rnf38Q8BI21 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf38Q8BI21 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf38Q8BI21 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Rnf38Q8BI21 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.42■■□□□ 1.02
Rnf38Q8BI21 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf38Q8BI21 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.42■■□□□ 1.02
Rnf38Q8BI21 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf38Q8BI21 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rnf38Q8BI21 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf38Q8BI21 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rnf38Q8BI21 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf38Q8BI21 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf38Q8BI21 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf38Q8BI21 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf38Q8BI21 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Rnf38Q8BI21 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Rnf38Q8BI21 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf38Q8BI21 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.39■■□□□ 1.01
Rnf38Q8BI21 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf38Q8BI21 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf38Q8BI21 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf38Q8BI21 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.38■■□□□ 1.01
Rnf38Q8BI21 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf38Q8BI21 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf38Q8BI21 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf38Q8BI21 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf38Q8BI21 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf38Q8BI21 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
Rnf38Q8BI21 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf38Q8BI21 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf38Q8BI21 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf38Q8BI21 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf38Q8BI21 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf38Q8BI21 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.35■■□□□ 1.01
Rnf38Q8BI21 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf38Q8BI21 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Gm7432-201ENSMUST00000210343 879 ntBASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf38Q8BI21 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.33■■□□□ 1.01
Rnf38Q8BI21 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf38Q8BI21 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.33■■□□□ 1.01
Rnf38Q8BI21 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf38Q8BI21 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf38Q8BI21 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf38Q8BI21 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf38Q8BI21 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms