Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Upk3bQ80YF6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk3bQ80YF6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.78■□□□□ 0.6
Upk3bQ80YF6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk3bQ80YF6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk3bQ80YF6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk3bQ80YF6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Upk3bQ80YF6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.76■□□□□ 0.59
Upk3bQ80YF6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk3bQ80YF6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Upk3bQ80YF6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk3bQ80YF6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upk3bQ80YF6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk3bQ80YF6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk3bQ80YF6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk3bQ80YF6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Upk3bQ80YF6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.7■□□□□ 0.58
Upk3bQ80YF6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk3bQ80YF6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk3bQ80YF6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk3bQ80YF6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk3bQ80YF6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk3bQ80YF6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk3bQ80YF6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Upk3bQ80YF6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms