Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Trim62Q80V85 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Trim62Q80V85 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim62Q80V85 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm7332-201ENSMUST00000118351 454 ntBASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm27502-201ENSMUST00000183495 199 ntBASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim62Q80V85 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim62Q80V85 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Trim62Q80V85 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.13■■□□□ 1.29
Trim62Q80V85 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.11■■□□□ 1.29
Trim62Q80V85 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trim62Q80V85 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Trim62Q80V85 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim62Q80V85 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trim62Q80V85 Cap2-205ENSMUST00000225824 1634 ntBASIC23.1■■□□□ 1.29
Trim62Q80V85 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Trim62Q80V85 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim62Q80V85 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Trim62Q80V85 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim62Q80V85 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.06■■□□□ 1.28
Trim62Q80V85 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.06■■□□□ 1.28
Trim62Q80V85 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim62Q80V85 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim62Q80V85 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim62Q80V85 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim62Q80V85 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim62Q80V85 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim62Q80V85 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
Trim62Q80V85 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Trim62Q80V85 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trim62Q80V85 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim62Q80V85 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim62Q80V85 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim62Q80V85 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim62Q80V85 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim62Q80V85 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Trim62Q80V85 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim62Q80V85 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim62Q80V85 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms