Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Trim62Q80V85 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Trim62Q80V85 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim62Q80V85 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim62Q80V85 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm7332-201ENSMUST00000118351 454 ntBASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm27502-201ENSMUST00000183495 199 ntBASIC23.15■■□□□ 1.3
Trim62Q80V85 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim62Q80V85 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim62Q80V85 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Trim62Q80V85 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim62Q80V85 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.13■■□□□ 1.29
Trim62Q80V85 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim62Q80V85 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim62Q80V85 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.11■■□□□ 1.29
Trim62Q80V85 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trim62Q80V85 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim62Q80V85 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Trim62Q80V85 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim62Q80V85 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trim62Q80V85 Cap2-205ENSMUST00000225824 1634 ntBASIC23.1■■□□□ 1.29
Trim62Q80V85 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim62Q80V85 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Trim62Q80V85 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Trim62Q80V85 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim62Q80V85 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim62Q80V85 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Trim62Q80V85 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim62Q80V85 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim62Q80V85 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.06■■□□□ 1.28
Trim62Q80V85 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.06■■□□□ 1.28
Trim62Q80V85 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim62Q80V85 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim62Q80V85 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim62Q80V85 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim62Q80V85 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim62Q80V85 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim62Q80V85 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim62Q80V85 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim62Q80V85 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
Trim62Q80V85 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim62Q80V85 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Trim62Q80V85 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim62Q80V85 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trim62Q80V85 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trim62Q80V85 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Trim62Q80V85 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim62Q80V85 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim62Q80V85 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim62Q80V85 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim62Q80V85 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim62Q80V85 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Trim62Q80V85 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim62Q80V85 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim62Q80V85 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms