Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Scn10aQ6QIY3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Scn10aQ6QIY3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scn10aQ6QIY3 Gm10232-201ENSMUST00000089221 720 ntBASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Amer2-203ENSMUST00000225247 2662 ntBASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scn10aQ6QIY3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scn10aQ6QIY3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Scn10aQ6QIY3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.14■■□□□ 1.77
Scn10aQ6QIY3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms