Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a7Q6PGE7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a7Q6PGE7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a7Q6PGE7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a7Q6PGE7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a7Q6PGE7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Slc6a7Q6PGE7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a7Q6PGE7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc6a7Q6PGE7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a7Q6PGE7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a7Q6PGE7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a7Q6PGE7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a7Q6PGE7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a7Q6PGE7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.13■□□□□ 0.81
Slc6a7Q6PGE7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a7Q6PGE7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Slc6a7Q6PGE7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
Slc6a7Q6PGE7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Slc6a7Q6PGE7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.1■□□□□ 0.81
Slc6a7Q6PGE7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a7Q6PGE7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a7Q6PGE7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Slc6a7Q6PGE7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a7Q6PGE7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
Slc6a7Q6PGE7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a7Q6PGE7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slc6a7Q6PGE7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a7Q6PGE7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a7Q6PGE7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a7Q6PGE7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a7Q6PGE7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Slc6a7Q6PGE7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc6a7Q6PGE7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a7Q6PGE7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a7Q6PGE7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a7Q6PGE7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a7Q6PGE7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.04■□□□□ 0.8
Slc6a7Q6PGE7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a7Q6PGE7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms