Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.03■□□□□ 0.96
Rnf220Q6PDX6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Rnf220Q6PDX6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf220Q6PDX6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf220Q6PDX6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf220Q6PDX6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf220Q6PDX6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf220Q6PDX6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rnf220Q6PDX6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf220Q6PDX6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf220Q6PDX6 Iqck-206ENSMUST00000208658 2891 ntBASIC21.01■□□□□ 0.95
Rnf220Q6PDX6 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.01■□□□□ 0.95
Rnf220Q6PDX6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rnf220Q6PDX6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf220Q6PDX6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.99■□□□□ 0.95
Rnf220Q6PDX6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf220Q6PDX6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf220Q6PDX6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.99■□□□□ 0.95
Rnf220Q6PDX6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf220Q6PDX6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf220Q6PDX6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf220Q6PDX6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf220Q6PDX6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf220Q6PDX6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.96■□□□□ 0.95
Rnf220Q6PDX6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf220Q6PDX6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf220Q6PDX6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf220Q6PDX6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf220Q6PDX6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf220Q6PDX6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf220Q6PDX6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf220Q6PDX6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rnf220Q6PDX6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf220Q6PDX6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf220Q6PDX6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf220Q6PDX6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf220Q6PDX6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf220Q6PDX6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf220Q6PDX6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf220Q6PDX6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf220Q6PDX6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf220Q6PDX6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf220Q6PDX6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rnf220Q6PDX6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf220Q6PDX6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf220Q6PDX6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf220Q6PDX6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.87■□□□□ 0.93
Rnf220Q6PDX6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf220Q6PDX6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rnf220Q6PDX6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf220Q6PDX6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms