Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Kdm3aQ6PCM1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Kdm3aQ6PCM1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
Kdm3aQ6PCM1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Kdm3aQ6PCM1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Kdm3aQ6PCM1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Kdm3aQ6PCM1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Kdm3aQ6PCM1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Kdm3aQ6PCM1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Kdm3aQ6PCM1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kdm3aQ6PCM1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kdm3aQ6PCM1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Kdm3aQ6PCM1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Kdm3aQ6PCM1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Kdm3aQ6PCM1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Kdm3aQ6PCM1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
Kdm3aQ6PCM1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Kdm3aQ6PCM1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Kdm3aQ6PCM1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Kdm3aQ6PCM1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Kdm3aQ6PCM1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Kdm3aQ6PCM1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Kdm3aQ6PCM1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Kdm3aQ6PCM1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Kdm3aQ6PCM1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Kdm3aQ6PCM1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Kdm3aQ6PCM1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Kdm3aQ6PCM1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Kdm3aQ6PCM1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Kdm3aQ6PCM1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Kdm3aQ6PCM1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Kdm3aQ6PCM1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Kdm3aQ6PCM1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.12■■□□□ 1.93
Kdm3aQ6PCM1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.12■■□□□ 1.93
Kdm3aQ6PCM1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Kdm3aQ6PCM1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.11■■□□□ 1.93
Kdm3aQ6PCM1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Kdm3aQ6PCM1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Kdm3aQ6PCM1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Kdm3aQ6PCM1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Kdm3aQ6PCM1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Kdm3aQ6PCM1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Kdm3aQ6PCM1 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.09■■□□□ 1.93
Kdm3aQ6PCM1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Kdm3aQ6PCM1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Kdm3aQ6PCM1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Kdm3aQ6PCM1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Kdm3aQ6PCM1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Kdm3aQ6PCM1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Kdm3aQ6PCM1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Kdm3aQ6PCM1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Kdm3aQ6PCM1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Kdm3aQ6PCM1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Kdm3aQ6PCM1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Kdm3aQ6PCM1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Kdm3aQ6PCM1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Kdm3aQ6PCM1 Gm5921-201ENSMUST00000075898 882 ntBASIC27.04■■□□□ 1.92
Kdm3aQ6PCM1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kdm3aQ6PCM1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.03■■□□□ 1.92
Kdm3aQ6PCM1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kdm3aQ6PCM1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Kdm3aQ6PCM1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Kdm3aQ6PCM1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Kdm3aQ6PCM1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Kdm3aQ6PCM1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Kdm3aQ6PCM1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
Kdm3aQ6PCM1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
Kdm3aQ6PCM1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Kdm3aQ6PCM1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.99■■□□□ 1.91
Kdm3aQ6PCM1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Kdm3aQ6PCM1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Kdm3aQ6PCM1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Kdm3aQ6PCM1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.97■■□□□ 1.91
Kdm3aQ6PCM1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Kdm3aQ6PCM1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.97■■□□□ 1.91
Kdm3aQ6PCM1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Kdm3aQ6PCM1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms