Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa4Q62425 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.19■□□□□ 0.18
Ndufa4Q62425 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ndufa4Q62425 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ndufa4Q62425 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Gm24970-201ENSMUST00000175582 82 ntBASIC16.17■□□□□ 0.18
Ndufa4Q62425 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ndufa4Q62425 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufa4Q62425 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndufa4Q62425 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ndufa4Q62425 Zfp131-205ENSMUST00000223812 663 ntBASIC16.16■□□□□ 0.18
Ndufa4Q62425 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufa4Q62425 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ndufa4Q62425 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.16■□□□□ 0.18
Ndufa4Q62425 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.16■□□□□ 0.18
Ndufa4Q62425 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa4Q62425 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa4Q62425 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.15■□□□□ 0.18
Ndufa4Q62425 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa4Q62425 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.15■□□□□ 0.18
Ndufa4Q62425 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ndufa4Q62425 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ndufa4Q62425 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa4Q62425 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndufa4Q62425 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa4Q62425 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa4Q62425 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa4Q62425 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.13■□□□□ 0.17
Ndufa4Q62425 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.13■□□□□ 0.17
Ndufa4Q62425 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ndufa4Q62425 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndufa4Q62425 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.13■□□□□ 0.17
Ndufa4Q62425 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.12■□□□□ 0.17
Ndufa4Q62425 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndufa4Q62425 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.11■□□□□ 0.17
Ndufa4Q62425 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ndufa4Q62425 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufa4Q62425 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ndufa4Q62425 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndufa4Q62425 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndufa4Q62425 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ndufa4Q62425 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Gm9397-201ENSMUST00000200125 605 ntBASIC16.09■□□□□ 0.17
Ndufa4Q62425 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndufa4Q62425 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ndufa4Q62425 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.08■□□□□ 0.16
Ndufa4Q62425 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndufa4Q62425 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ndufa4Q62425 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ndufa4Q62425 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.06■□□□□ 0.16
Ndufa4Q62425 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndufa4Q62425 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ndufa4Q62425 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.06■□□□□ 0.16
Ndufa4Q62425 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndufa4Q62425 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ndufa4Q62425 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndufa4Q62425 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ndufa4Q62425 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms