Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem40Q4FJU9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.93■□□□□ 0.62
Tmem40Q4FJU9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Tmem40Q4FJU9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem40Q4FJU9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem40Q4FJU9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem40Q4FJU9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem40Q4FJU9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Gm44428-201ENSMUST00000204474 874 ntBASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem40Q4FJU9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem40Q4FJU9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.88■□□□□ 0.61
Tmem40Q4FJU9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tmem40Q4FJU9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem40Q4FJU9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem40Q4FJU9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem40Q4FJU9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem40Q4FJU9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.87■□□□□ 0.61
Tmem40Q4FJU9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.87■□□□□ 0.61
Tmem40Q4FJU9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.87■□□□□ 0.61
Tmem40Q4FJU9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Tmem40Q4FJU9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem40Q4FJU9 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.85■□□□□ 0.61
Tmem40Q4FJU9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem40Q4FJU9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem40Q4FJU9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem40Q4FJU9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem40Q4FJU9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem40Q4FJU9 Gm15820-201ENSMUST00000201566 728 ntBASIC18.83■□□□□ 0.6
Tmem40Q4FJU9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem40Q4FJU9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem40Q4FJU9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem40Q4FJU9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem40Q4FJU9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem40Q4FJU9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem40Q4FJU9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem40Q4FJU9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem40Q4FJU9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem40Q4FJU9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tmem40Q4FJU9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Rps24-207ENSMUST00000224568 714 ntBASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms