Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim72Q1XH17 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim72Q1XH17 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.83■■□□□ 1.4
Trim72Q1XH17 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Trim72Q1XH17 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim72Q1XH17 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim72Q1XH17 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim72Q1XH17 Gm11687-201ENSMUST00000118911 886 ntBASIC23.82■■□□□ 1.4
Trim72Q1XH17 Gm16437-201ENSMUST00000025669 507 ntBASIC23.82■■□□□ 1.4
Trim72Q1XH17 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim72Q1XH17 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Trim72Q1XH17 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim72Q1XH17 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim72Q1XH17 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim72Q1XH17 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim72Q1XH17 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.81■■□□□ 1.4
Trim72Q1XH17 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim72Q1XH17 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim72Q1XH17 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim72Q1XH17 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim72Q1XH17 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim72Q1XH17 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Trim72Q1XH17 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Trim72Q1XH17 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim72Q1XH17 Gm44428-201ENSMUST00000204474 874 ntBASIC23.78■■□□□ 1.4
Trim72Q1XH17 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Trim72Q1XH17 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim72Q1XH17 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim72Q1XH17 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trim72Q1XH17 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim72Q1XH17 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim72Q1XH17 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim72Q1XH17 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
Trim72Q1XH17 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Trim72Q1XH17 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim72Q1XH17 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim72Q1XH17 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim72Q1XH17 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim72Q1XH17 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Trim72Q1XH17 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim72Q1XH17 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim72Q1XH17 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim72Q1XH17 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Trim72Q1XH17 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Trim72Q1XH17 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim72Q1XH17 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim72Q1XH17 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim72Q1XH17 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim72Q1XH17 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim72Q1XH17 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim72Q1XH17 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.69■■□□□ 1.38
Trim72Q1XH17 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.69■■□□□ 1.38
Trim72Q1XH17 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Trim72Q1XH17 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim72Q1XH17 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim72Q1XH17 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.67■■□□□ 1.38
Trim72Q1XH17 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.66■■□□□ 1.38
Trim72Q1XH17 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Trim72Q1XH17 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.65■■□□□ 1.38
Trim72Q1XH17 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Gm11175-201ENSMUST00000116172 543 ntBASIC23.65■■□□□ 1.38
Trim72Q1XH17 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim72Q1XH17 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim72Q1XH17 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim72Q1XH17 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.64■■□□□ 1.37
Trim72Q1XH17 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim72Q1XH17 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Trim72Q1XH17 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim72Q1XH17 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim72Q1XH17 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms