Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abca1P41233 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abca1P41233 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Abca1P41233 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Abca1P41233 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.38■□□□□ 0.53
Abca1P41233 Gm45444-201ENSMUST00000211394 898 ntBASIC18.38■□□□□ 0.53
Abca1P41233 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.38■□□□□ 0.53
Abca1P41233 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abca1P41233 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.37■□□□□ 0.53
Abca1P41233 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca1P41233 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca1P41233 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Abca1P41233 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abca1P41233 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abca1P41233 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abca1P41233 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abca1P41233 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Abca1P41233 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Abca1P41233 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abca1P41233 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abca1P41233 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca1P41233 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abca1P41233 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abca1P41233 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abca1P41233 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca1P41233 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Abca1P41233 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.34■□□□□ 0.53
Abca1P41233 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.34■□□□□ 0.53
Abca1P41233 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Abca1P41233 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Abca1P41233 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abca1P41233 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.33■□□□□ 0.53
Abca1P41233 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Abca1P41233 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca1P41233 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abca1P41233 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abca1P41233 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.32■□□□□ 0.52
Abca1P41233 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Abca1P41233 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.32■□□□□ 0.52
Abca1P41233 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abca1P41233 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abca1P41233 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.31■□□□□ 0.52
Abca1P41233 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca1P41233 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca1P41233 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abca1P41233 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca1P41233 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca1P41233 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abca1P41233 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Abca1P41233 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.29■□□□□ 0.52
Abca1P41233 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abca1P41233 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca1P41233 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abca1P41233 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.28■□□□□ 0.52
Abca1P41233 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca1P41233 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abca1P41233 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abca1P41233 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Abca1P41233 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abca1P41233 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.27■□□□□ 0.51
Abca1P41233 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.26■□□□□ 0.51
Abca1P41233 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Abca1P41233 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abca1P41233 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abca1P41233 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abca1P41233 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.26■□□□□ 0.51
Abca1P41233 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.25■□□□□ 0.51
Abca1P41233 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.25■□□□□ 0.51
Abca1P41233 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.25■□□□□ 0.51
Abca1P41233 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.25■□□□□ 0.51
Abca1P41233 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.25■□□□□ 0.51
Abca1P41233 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Abca1P41233 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abca1P41233 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.24■□□□□ 0.51
Abca1P41233 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abca1P41233 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abca1P41233 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Abca1P41233 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abca1P41233 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.23■□□□□ 0.51
Abca1P41233 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.22■□□□□ 0.51
Abca1P41233 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abca1P41233 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Abca1P41233 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms