Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sox6P40645 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sox6P40645 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.77■□□□□ 0.92
Sox6P40645 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox6P40645 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox6P40645 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox6P40645 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox6P40645 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.76■□□□□ 0.91
Sox6P40645 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox6P40645 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.76■□□□□ 0.91
Sox6P40645 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox6P40645 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.76■□□□□ 0.91
Sox6P40645 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox6P40645 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox6P40645 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.75■□□□□ 0.91
Sox6P40645 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox6P40645 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox6P40645 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.73■□□□□ 0.91
Sox6P40645 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox6P40645 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox6P40645 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox6P40645 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sox6P40645 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox6P40645 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox6P40645 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox6P40645 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox6P40645 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox6P40645 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox6P40645 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sox6P40645 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox6P40645 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox6P40645 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox6P40645 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox6P40645 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox6P40645 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox6P40645 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.67■□□□□ 0.9
Sox6P40645 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.67■□□□□ 0.9
Sox6P40645 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox6P40645 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sox6P40645 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.66■□□□□ 0.9
Sox6P40645 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sox6P40645 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sox6P40645 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox6P40645 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox6P40645 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox6P40645 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox6P40645 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox6P40645 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox6P40645 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.65■□□□□ 0.9
Sox6P40645 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Sox6P40645 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox6P40645 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox6P40645 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sox6P40645 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sox6P40645 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox6P40645 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox6P40645 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox6P40645 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sox6P40645 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.64■□□□□ 0.89
Sox6P40645 Gm4799-201ENSMUST00000095396 657 ntBASIC20.64■□□□□ 0.89
Sox6P40645 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox6P40645 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sox6P40645 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox6P40645 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Sox6P40645 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox6P40645 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox6P40645 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox6P40645 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.63■□□□□ 0.89
Sox6P40645 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox6P40645 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sox6P40645 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sox6P40645 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox6P40645 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox6P40645 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox6P40645 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox6P40645 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sox6P40645 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
Sox6P40645 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox6P40645 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sox6P40645 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox6P40645 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox6P40645 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox6P40645 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox6P40645 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sox6P40645 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sox6P40645 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sox6P40645 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sox6P40645 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sox6P40645 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox6P40645 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox6P40645 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox6P40645 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.59■□□□□ 0.89
Sox6P40645 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox6P40645 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox6P40645 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms