Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fn1P11276 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.86■□□□□ 0.45
Fn1P11276 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.86■□□□□ 0.45
Fn1P11276 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fn1P11276 Gm8495-201ENSMUST00000188740 694 ntBASIC17.85■□□□□ 0.45
Fn1P11276 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fn1P11276 Gm12922-201ENSMUST00000120626 809 ntBASIC17.84■□□□□ 0.45
Fn1P11276 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.84■□□□□ 0.45
Fn1P11276 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fn1P11276 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Fn1P11276 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.83■□□□□ 0.45
Fn1P11276 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Fn1P11276 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.83■□□□□ 0.44
Fn1P11276 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fn1P11276 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fn1P11276 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fn1P11276 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Fn1P11276 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.82■□□□□ 0.44
Fn1P11276 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.81■□□□□ 0.44
Fn1P11276 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Fn1P11276 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Fn1P11276 Gm22238-201ENSMUST00000175222 88 ntBASIC17.79■□□□□ 0.44
Fn1P11276 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fn1P11276 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Fn1P11276 Gm12821-201ENSMUST00000120022 600 ntBASIC17.78■□□□□ 0.44
Fn1P11276 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fn1P11276 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fn1P11276 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.77■□□□□ 0.44
Fn1P11276 Gm45417-201ENSMUST00000209533 758 ntBASIC17.77■□□□□ 0.44
Fn1P11276 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fn1P11276 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.77■□□□□ 0.43
Fn1P11276 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.77■□□□□ 0.43
Fn1P11276 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fn1P11276 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Fn1P11276 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.76■□□□□ 0.43
Fn1P11276 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.76■□□□□ 0.43
Fn1P11276 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fn1P11276 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.75■□□□□ 0.43
Fn1P11276 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
Fn1P11276 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fn1P11276 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Gm18284-201ENSMUST00000172604 624 ntBASIC17.74■□□□□ 0.43
Fn1P11276 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.74■□□□□ 0.43
Fn1P11276 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.74■□□□□ 0.43
Fn1P11276 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.74■□□□□ 0.43
Fn1P11276 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Fn1P11276 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fn1P11276 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fn1P11276 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.73■□□□□ 0.43
Fn1P11276 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Fn1P11276 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Fn1P11276 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Fn1P11276 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.71■□□□□ 0.43
Fn1P11276 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.71■□□□□ 0.43
Fn1P11276 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fn1P11276 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Fn1P11276 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.71■□□□□ 0.42
Fn1P11276 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Fn1P11276 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Fn1P11276 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.7■□□□□ 0.42
Fn1P11276 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fn1P11276 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms