Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CcnkO88874 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.62■□□□□ 0.73
CcnkO88874 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CcnkO88874 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CcnkO88874 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CcnkO88874 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CcnkO88874 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CcnkO88874 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CcnkO88874 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CcnkO88874 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CcnkO88874 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CcnkO88874 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CcnkO88874 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.6■□□□□ 0.73
CcnkO88874 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CcnkO88874 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CcnkO88874 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.59■□□□□ 0.73
CcnkO88874 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CcnkO88874 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CcnkO88874 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CcnkO88874 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CcnkO88874 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CcnkO88874 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CcnkO88874 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CcnkO88874 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CcnkO88874 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CcnkO88874 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CcnkO88874 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.57■□□□□ 0.72
CcnkO88874 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CcnkO88874 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CcnkO88874 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
CcnkO88874 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CcnkO88874 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.56■□□□□ 0.72
CcnkO88874 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CcnkO88874 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcnkO88874 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcnkO88874 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CcnkO88874 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CcnkO88874 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.55■□□□□ 0.72
CcnkO88874 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcnkO88874 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcnkO88874 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CcnkO88874 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CcnkO88874 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CcnkO88874 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CcnkO88874 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CcnkO88874 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CcnkO88874 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CcnkO88874 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CcnkO88874 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Gm37136-201ENSMUST00000194368 194 ntBASIC19.53■□□□□ 0.72
CcnkO88874 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.53■□□□□ 0.72
CcnkO88874 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CcnkO88874 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CcnkO88874 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CcnkO88874 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CcnkO88874 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.71
CcnkO88874 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CcnkO88874 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CcnkO88874 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CcnkO88874 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CcnkO88874 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcnkO88874 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcnkO88874 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CcnkO88874 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CcnkO88874 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CcnkO88874 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CcnkO88874 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CcnkO88874 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CcnkO88874 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.47■□□□□ 0.71
CcnkO88874 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms