Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.8■■□□□ 1.08
Cdh16O88338 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh16O88338 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cdh16O88338 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cdh16O88338 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh16O88338 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Cdh16O88338 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh16O88338 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh16O88338 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh16O88338 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh16O88338 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cdh16O88338 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh16O88338 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.78■■□□□ 1.08
Cdh16O88338 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh16O88338 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh16O88338 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cdh16O88338 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cdh16O88338 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
Cdh16O88338 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh16O88338 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh16O88338 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdh16O88338 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh16O88338 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh16O88338 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Cdh16O88338 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cdh16O88338 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdh16O88338 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh16O88338 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdh16O88338 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cdh16O88338 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh16O88338 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh16O88338 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh16O88338 Gm30023-201ENSMUST00000197970 889 ntBASIC21.75■■□□□ 1.07
Cdh16O88338 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh16O88338 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh16O88338 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh16O88338 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh16O88338 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh16O88338 Notumos-201ENSMUST00000151998 2659 ntBASIC21.73■■□□□ 1.07
Cdh16O88338 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Cdh16O88338 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Cdh16O88338 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cdh16O88338 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh16O88338 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh16O88338 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Cdh16O88338 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh16O88338 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh16O88338 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cdh16O88338 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh16O88338 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdh16O88338 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh16O88338 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh16O88338 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh16O88338 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdh16O88338 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdh16O88338 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh16O88338 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Cdh16O88338 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cdh16O88338 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdh16O88338 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh16O88338 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.69■■□□□ 1.06
Cdh16O88338 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh16O88338 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh16O88338 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh16O88338 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh16O88338 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.67■■□□□ 1.06
Cdh16O88338 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh16O88338 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdh16O88338 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh16O88338 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.66■■□□□ 1.06
Cdh16O88338 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh16O88338 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh16O88338 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh16O88338 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.65■■□□□ 1.06
Cdh16O88338 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh16O88338 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh16O88338 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh16O88338 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh16O88338 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cdh16O88338 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.64■■□□□ 1.05
Cdh16O88338 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.64■■□□□ 1.05
Cdh16O88338 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cdh16O88338 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh16O88338 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms