Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capn1O35350 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capn1O35350 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn1O35350 Gm10420-201ENSMUST00000121713 882 ntBASIC20.47■□□□□ 0.87
Capn1O35350 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Capn1O35350 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.47■□□□□ 0.87
Capn1O35350 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Capn1O35350 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.46■□□□□ 0.87
Capn1O35350 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Capn1O35350 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.45■□□□□ 0.86
Capn1O35350 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Capn1O35350 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn1O35350 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.44■□□□□ 0.86
Capn1O35350 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn1O35350 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capn1O35350 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Capn1O35350 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.42■□□□□ 0.86
Capn1O35350 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Capn1O35350 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Capn1O35350 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Capn1O35350 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.41■□□□□ 0.86
Capn1O35350 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Capn1O35350 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Capn1O35350 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capn1O35350 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capn1O35350 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.4■□□□□ 0.86
Capn1O35350 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capn1O35350 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capn1O35350 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Capn1O35350 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.39■□□□□ 0.85
Capn1O35350 Gm44428-201ENSMUST00000204474 874 ntBASIC20.39■□□□□ 0.85
Capn1O35350 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capn1O35350 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capn1O35350 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capn1O35350 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Capn1O35350 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Capn1O35350 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Capn1O35350 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Capn1O35350 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Capn1O35350 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Capn1O35350 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Capn1O35350 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Capn1O35350 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Capn1O35350 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Capn1O35350 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.37■□□□□ 0.85
Capn1O35350 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.37■□□□□ 0.85
Capn1O35350 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Capn1O35350 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capn1O35350 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capn1O35350 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.36■□□□□ 0.85
Capn1O35350 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capn1O35350 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.36■□□□□ 0.85
Capn1O35350 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Capn1O35350 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Capn1O35350 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Capn1O35350 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Capn1O35350 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Capn1O35350 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Capn1O35350 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Capn1O35350 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capn1O35350 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capn1O35350 Gm5921-201ENSMUST00000075898 882 ntBASIC20.33■□□□□ 0.85
Capn1O35350 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Capn1O35350 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Capn1O35350 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Capn1O35350 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Capn1O35350 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.32■□□□□ 0.84
Capn1O35350 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Capn1O35350 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Capn1O35350 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Capn1O35350 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Capn1O35350 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Capn1O35350 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.31■□□□□ 0.84
Capn1O35350 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Capn1O35350 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capn1O35350 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Capn1O35350 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capn1O35350 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Capn1O35350 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.3■□□□□ 0.84
Capn1O35350 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Capn1O35350 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms