Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc7bE9Q9Y3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc7bE9Q9Y3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc7bE9Q9Y3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc7bE9Q9Y3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.69■□□□□ 0.9
Ccdc7bE9Q9Y3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7bE9Q9Y3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7bE9Q9Y3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc7bE9Q9Y3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc7bE9Q9Y3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7bE9Q9Y3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7bE9Q9Y3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.64■□□□□ 0.9
Ccdc7bE9Q9Y3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc7bE9Q9Y3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7bE9Q9Y3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7bE9Q9Y3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc7bE9Q9Y3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7bE9Q9Y3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.6■□□□□ 0.89
Ccdc7bE9Q9Y3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc7bE9Q9Y3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.6■□□□□ 0.89
Ccdc7bE9Q9Y3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7bE9Q9Y3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7bE9Q9Y3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.59■□□□□ 0.89
Ccdc7bE9Q9Y3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc7bE9Q9Y3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.58■□□□□ 0.89
Ccdc7bE9Q9Y3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.58■□□□□ 0.89
Ccdc7bE9Q9Y3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc7bE9Q9Y3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc7bE9Q9Y3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccdc7bE9Q9Y3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.56■□□□□ 0.88
Ccdc7bE9Q9Y3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms